Package: Vicus 0.99.0

Koki Tsuyuzaki

Vicus: Exploiting Local Structures to Improve Network-Based Analysis of Biological Data

Compared with the similar graph embedding method such as Laplacian Eigenmaps, 'Vicus' can exploit more local structures of graph data. For the details of the methods, see the reference section of 'GitHub' README.md <https://github.com/rikenbit/Vicus>.

Authors:Koki Tsuyuzaki [aut, cre]

Vicus_0.99.0.tar.gz
Vicus_0.99.0.zip(r-4.7)Vicus_0.99.0.zip(r-4.6)Vicus_0.99.0.zip(r-4.5)
Vicus_0.99.0.tgz(r-4.6-any)Vicus_0.99.0.tgz(r-4.5-any)
Vicus_0.99.0.tar.gz(r-4.7-any)Vicus_0.99.0.tar.gz(r-4.6-any)
Vicus_0.99.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
Vicus/json (API)

# Install 'Vicus' in R:

install.packages('Vicus', repos = c('https://rikenbit.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/rikenbit/vicus/issues

On CRAN:

5.18 score 2 stars 5 packages 406 downloads 2 exports 6 dependencies

Last updated from:4be58d784d. Checks:9 OK. Indexed: yes.

Target	Result	Time
linux-devel-x86_64	OK	139
source / vignettes	OK	223
linux-release-x86_64	OK	137
macos-release-arm64	OK	185
macos-oldrel-arm64	OK	96
windows-devel	OK	85
windows-release	OK	105
windows-oldrel	OK	91
wasm-release	OK	130

Exports:embedding graphMatrix

Dependencies:lattice Matrix RANN Rcpp RcppEigen RSpectra

Vicus: Exploiting local structures to improve network-based analysis of biological data

Introduction | 2D Embedding | 3D Embedding | Session Information | References

Rendered fromVicus.Rmdusingknitr::rmarkdown

Last update: 2023-03-23
Started: 2023-03-23

Citation

Development and contributors

Readme and manuals

Help Manual

Help page	Topics
Exploiting Local Structures to Improve Network-Based Analysis of Biological Data	Vicus-package
Graph Embedding	embedding
Graph Laplacian type matrix	graphMatrix